{"id":917,"date":"2025-07-14T10:15:35","date_gmt":"2025-07-14T08:15:35","guid":{"rendered":"https:\/\/flowcytometryacademy.com\/?p=917"},"modified":"2025-04-28T16:52:20","modified_gmt":"2025-04-28T14:52:20","slug":"single-cell-analysis-boot-camp-2025","status":"publish","type":"post","link":"https:\/\/flowcytometryacademy.com\/en\/single-cell-analysis-boot-camp-2025\/","title":{"rendered":"SINGLE CELL ANALYSIS BOOT CAMP"},"content":{"rendered":"<p><strong>Theoretical-practical dry course<\/strong><\/p>\n<p>The increasing accessibility of single-cell RNA sequencing (scRNA-seq) platforms is creating a growing need to train individuals capable of analyzing these results. ScRNA-seq data analysis requires new approaches, as assumptions from bulk RNA-seq experiments cannot be applied. This course will illustrate issues that can be addressed by scRNA-seq and discuss the most appropriate computational and statistical methods for scRNA-seq analysis.<br \/>\nThe course aims to provide participants with skills to:<\/p>\n<ul>\n<li>Understand the basic concepts of scRNA-seq data analysis<\/li>\n<li>Use the scRNA-seq Seurat data workflow<\/li>\n<li>Process and analyze scRNA-seq data, including cell classification, identification of specific cell populations, integration, and batch correction<\/li>\n<li>Measure gene expression dynamics at the single-cell level<\/li>\n<li>Perform gene set enrichment analysis, characterize cell-cell interactions, and analyze cellular trajectories<\/li>\n<li>Conduct TCR analysis and multiome integration<\/li>\n<li>Recognize the importance of scRNA-seq data analysis in driving discovery and innovation in medicine, biology, and biotechnology<\/li>\n<\/ul>\n<p><strong>Teaching methodology:<\/strong><br \/>\nLectures and seminars, dry lab (individual activities under the guidance of tutors, in an informatics room)<\/p>\n<p><strong>Number of participants: 30<\/strong><\/p>\n<h4>Location:<\/h4>\n<p>Universit\u00e0 degli Studi di Milano<br \/>\nVia Santa Sofia, 9\/1<br \/>\n20122 Milano<\/p>\n<h4>Referents and contacts:<\/h4>\n<p>Prof. Domenico Mavilio \u2013 Prof.ssa Silvia Della Bella<br \/>\n<a href=\"mailto:citometria.biometra@unimi.it\" target=\"_blank\" rel=\"noopener\">citometria.biometra@unimi.it<\/a><br \/>\n<a href=\"http:\/\/www.linkedin.com\/in\/flowcytometryacademy-unimi\" target=\"_blank\" rel=\"noopener\">www.linkedin.com\/in\/flowcytometryacademy-unimi<\/a><\/p>\n<h4>Course Language:<\/h4>\n<p>English<\/p>\n<h4>Application for admission:<\/h4>\n<p>Accessible from the 18th of April 2025 to the 4th of July 2025.<\/p>\n<h4>Registration fee:<\/h4>\n<p><strong>616,00 \u20ac VAT included<\/strong><\/p>\n<p>On request, travel and hotel reservation can be managed by Materia Prima. If interested, please refer to <a href=\"mailto:segreteria@materia1a.it\" target=\"_blank\" rel=\"noopener\">segreteria@materia1a.it<\/a> to receive a quotation.<\/p>\n","protected":false},"excerpt":{"rendered":"<p>Theoretical-practical dry course The increasing accessibility of single-cell RNA sequencing (scRNA-seq) platforms is creating a growing need to train individuals capable of analyzing these results. ScRNA-seq data analysis requires new approaches, as assumptions from bulk RNA-seq experiments cannot be applied. This course will illustrate issues that can be addressed by scRNA-seq and discuss the most&#8230;<\/p>\n","protected":false},"author":1,"featured_media":492,"comment_status":"closed","ping_status":"open","sticky":false,"template":"","format":"standard","meta":{"footnotes":""},"categories":[13],"tags":[],"class_list":["post-917","post","type-post","status-publish","format-standard","has-post-thumbnail","hentry","category-course"],"_links":{"self":[{"href":"https:\/\/flowcytometryacademy.com\/en\/wp-json\/wp\/v2\/posts\/917","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/flowcytometryacademy.com\/en\/wp-json\/wp\/v2\/posts"}],"about":[{"href":"https:\/\/flowcytometryacademy.com\/en\/wp-json\/wp\/v2\/types\/post"}],"author":[{"embeddable":true,"href":"https:\/\/flowcytometryacademy.com\/en\/wp-json\/wp\/v2\/users\/1"}],"replies":[{"embeddable":true,"href":"https:\/\/flowcytometryacademy.com\/en\/wp-json\/wp\/v2\/comments?post=917"}],"version-history":[{"count":8,"href":"https:\/\/flowcytometryacademy.com\/en\/wp-json\/wp\/v2\/posts\/917\/revisions"}],"predecessor-version":[{"id":998,"href":"https:\/\/flowcytometryacademy.com\/en\/wp-json\/wp\/v2\/posts\/917\/revisions\/998"}],"wp:featuredmedia":[{"embeddable":true,"href":"https:\/\/flowcytometryacademy.com\/en\/wp-json\/wp\/v2\/media\/492"}],"wp:attachment":[{"href":"https:\/\/flowcytometryacademy.com\/en\/wp-json\/wp\/v2\/media?parent=917"}],"wp:term":[{"taxonomy":"category","embeddable":true,"href":"https:\/\/flowcytometryacademy.com\/en\/wp-json\/wp\/v2\/categories?post=917"},{"taxonomy":"post_tag","embeddable":true,"href":"https:\/\/flowcytometryacademy.com\/en\/wp-json\/wp\/v2\/tags?post=917"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}